Job Description P75864 Confidence 97.94% Date Thu Jan 5 12:15:14 GMT 2012 Rank 272 Aligned Residues 149 % Identity 15% Template c3pt6B_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: crystal structure of mouse dnmt1(650-1602) in complex with dna Resolution 3.00 Å

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		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.		.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																							.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	A	G	L	G	G	A	.	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	L	T	G	R	A	H	R	L	I	Q	A	D	C	L	A	W	L	R	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																					.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	H	Q	A	G	I	S	E	T	L	W	A	I	E	M	W	D	P	A	A	Q	A	F	R	L	N	N	.	.	.	.	.	.	.	P	G	T	T	V	F	T	E	D	C	N	V	L	L	K	L	V	M	A	G	E	V	T	N	S	L	G	Q	R	L	P
Template Known Secondary structure							T		T	T											T										S	S												.	.	.	.	.	.	.	T	T	S					S											T	T		S	B		T	T			B
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		1143	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.								.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.
			606	.	.	.	610	.	.	.	.	.	.	.			.	.	620	.	.	.	.			.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.									.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure		.													.	.								.	.																																	.	.	.	.	.	.	.	.
Query SS confidence		.													.	.								.	.																																	.	.	.	.	.	.	.	.
Query Sequence		.	N	E	Q	F	D	L	I	F	I	D	P	P	.	.	T	F	S	N	S	K	R	.	.	M	E	D	A	F	D	V	Q	R	D	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F	S	N	.	.	.	.	.	.	.	.	N	K	R	G	F	R	M	D	L	D	G	L	A	K	L	G
Query Conservation		.													.	.								.	.																																	.	.	.	.	.	.	.	.
Alig confidence		.													.	.								.	.																										.							.	.	.	.	.	.	.	.
Template Conservation																																																			.
Template Sequence		Q	K	G	D	V	E	M	L	C	G	G	P	P	C	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K	F	K	N	S	L	V	V	S	F	L	S	Y	C	D	Y	Y	R	P	R	.	F	F	L	L	E	N	V	R	N	F	V	S	Y	R	R	S	M	V	L	K	L	T	L	R	C	L	V	R	M	G
Template Known Secondary structure			T	T	T		S									T	T	S			S	S												T	S															S	.								S	G	G	G	T																	T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		1216	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.		.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.
		673	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	Q	E	I	T	Q	K	T	L	S	Q	D	F	A	R	N	R	Q	I	H	N	C	W	L	I
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		Y	Q	C	T	F	G	V	L	Q	.	.	A	G	Q	Y	G	V	A	Q	T	R	R	R	A	I	I	L
Template Known Secondary structure											.	.	G	G	G	G	T		S	B
Template Predicted Secondary structure											.	.
Template SS confidence
		1295	.	.	.	.	1300	.	.	.			.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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