Return to main results Retrieve Phyre Job Id

Job DescriptionP75864
Confidence95.81%DateThu Jan 5 12:15:14 GMT 2012
Rank310Aligned Residues96
% Identity13%Templatec3p9kD_
PDB info PDB header:transferaseChain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   536...540.........550.........560 .........570.........580.........590.........600.........610....
Predicted Secondary structure 









.















Query SS confidence 
























.





















































Query Sequence  MSKGKDFLNLFSYTGSATVHAGLGG. ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFI
Query Conservation   
 











 


 

 

.
  
  

 
   
  
  
  

            
    
      

 


Alig confidence 
























.











........







.










....









Template Conservation        






 
     
    
       
    ........        .           ....     
    
Template Sequence  FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHV. . . . . . . . ISEAPQFP. GVTHVGGDMFK. . . . EVPSGDTILM
Template Known Secondary structure  TTT
ST
TTS
TT

........TT



T.TS
TTT....




S
Template Predicted Secondary structure 















........


.






....





Template SS confidence 















































































   195....200.........210.........220.........230.. .......240 .........250. ........260.
 
   615....620.........630 .........640.........650.....
Predicted Secondary structure 









..




Query SS confidence 















. .
























Query Sequence  DPPTFSNSKRMEDAFD. . VQRDHLALMKDLKRLLRAGGTIMFS
Query Conservation 


 
  

       ..  

   
   
  

 


 
  
Alig confidence  ...........




..
























Template Conservation  ...........  


          
  
  

 


 


 
Template Sequence  . . . . . . . . . . . KWILHDWSDQHCATLLKNCYDALPAHGKVVLV
Template Known Secondary structure  ...........S
GGGB
S
TT
Template Predicted Secondary structure  ...........











Template SS confidence 










































   262.......270.........280.........290...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions