Job Description P75864 Confidence 96.82% Date Thu Jan 5 12:15:14 GMT 2012 Rank 302 Aligned Residues 155 % Identity 15% Template c3me5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna cytosine methylase from shigella2 flexneri 2a str. 301 Resolution 1.75 Å

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		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.							.	610	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	A	G	L	G	G	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	L	T	G	R	A	H	R	L	I	Q	A	D	C	L	A	W	L	R	E	A	N	E	Q	.	.	.	.	.	.	F	D	L	I	F	I
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																																.	.	.	.																																			.	.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	C	V	F	T	S	E	W	N	.	.	.	.	K	H	A	V	R	T	Y	K	A	N	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L	S	H	Q	E	G	V	S	D	E	A	A	A	E	H	I	R	Q
Template Known Secondary structure							S		T	T	S								T	T	T											.	.	.	.											S				T	T	T					S		T						T	T		T	T	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		615	.	.	.			.	620	.	.	.	.	.	.	.	.	.		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.								.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure						.	.												.																										.	.	.	.	.	.	.
Query SS confidence						.	.												.																										.	.	.	.	.	.	.
Query Sequence		D	P	P	T	.	.	F	S	N	S	K	R	M	E	D	A	F	.	D	V	Q	R	D	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F	.	.	.	.	.	.	.	S	N	N	K	R	G	F	R	M	D	L	D	G	L	A	K	L	G	L	K	A	Q	E	I	T	Q	K	T	L	S
Query Conservation						.	.												.																										.	.	.	.	.	.	.
Alig confidence						.	.												.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	C	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	A	R	R	P	A	X	F	V	L	E	N	V	K	N	L	K	S	H	D	K	G	K	T	F	R	I	I	X	Q	T	L	D	E	L	G	Y	D	V	A	D	A	E	D	N	G	P	D
Template Known Secondary structure			S				S													T	T	T	T	S															S								T	T	T	T	T	G	G	G	G													T	T				T	T	T	T			S	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
								685	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	Q	D	F	A	R	N	R	Q	I	H	N	C	W	L	I
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	K	I	I	D	G	K	H	F	L	P	Q	H	R	E	R	I	V	L	V
Template Known Secondary structure			T	T				G	G	G	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions