Job Description P75864 Confidence 99.38% Date Thu Jan 5 12:15:14 GMT 2012 Rank 59 Aligned Residues 244 % Identity 15% Template c3m6wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine Resolution 1.30 Å

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		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.					.	520	.	.	.	.	.	.	.
Predicted Secondary structure																																												.																									.	.	.	.
Query SS confidence																																												.																									.	.	.	.
Query Sequence		H	K	A	R	Q	R	L	F	D	I	I	A	A	T	I	S	V	L	G	I	A	P	N	K	L	V	L	K	T	R	E	R	Q	K	G	K	N	Q	Y	Q	K	L	.	G	E	K	G	E	F	L	E	V	T	E	Y	N	A	H	L	W	V	N	L	T	D	Y	L	.	.	.	.	D	T	G	L	F	L	D	H	R
Query Conservation																																												.																									.	.	.	.
Alig confidence																																												.																									.	.	.	.
Template Conservation
Template Sequence		S	R	M	A	E	L	L	G	E	E	F	P	A	F	L	K	A	L	T	E	G	K	R	T	Y	G	L	R	V	N	T	L	K	L	P	P	E	A	F	Q	R	I	S	P	W	P	L	R	P	I	P	W	C	Q	E	G	F	Y	Y	P	E	E	A	R	P	G	P	H	P	F	F	Y	A	G	L	Y	Y	I	Q	E
Template Known Secondary structure									G	G	G										T	S										T	T	T											S	S						T	T									T	T				S	S	S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		528	.	530	.	.	.	.	.	.	.				.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.			.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure												.	.	.																			.	.
Query SS confidence												.	.	.																			.	.
Query Sequence		I	A	R	R	M	L	G	Q	M	S	.	.	.	K	G	K	D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	.	.	A	G	L	G	G	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	L	T	G	R	A	H	R	L	I	Q	A	D	C	L	A	W	L
Query Conservation												.	.	.																			.	.
Alig confidence												.	.	.																			.	.																																.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		P	S	A	Q	A	V	G	V	L	L	D	P	K	P	G	E	R	V	L	D	L	A	A	A	P	G	G	K	T	T	H	L	A	A	R	M	G	G	K	G	L	L	L	A	N	E	V	D	G	K	R	V	R	G	L	L	E	N	V	E	R	W	G	A	.	.	.	P	L	A	V	T	Q	A	P	P	R	A	L	A
Template Known Secondary structure		T	T	T											T	T						S	S		T	T											T	T	T		S							S																		.	.	.							S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.												.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	A	N	E	Q	F	D	L	I	F	I	D	P	P	.	.	.	.	.	.	.	.	.	.	.	T	F	S	N	S	K	R	M	E	D	A	F	D	V	Q	R	D	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F	S	N	N	K	R	G	F	R	M	D	L	D	G	L	A	K	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	F	G	T	Y	F	H	R	V	L	L	D	A	P	C	S	G	E	G	M	F	R	K	D	R	E	A	A	R	H	W	G	P	S	A	P	K	R	M	A	E	V	Q	K	A	L	L	A	Q	A	S	R	L	L	G	P	G	G	V	L	V	Y	S	T	C	T	F	A	P	E	E	N	E	G	V	V	A	H	F
Template Known Secondary structure						S														G	G	G	T	T	T		T	T	S	G	G	G			T	T																		T	T												S				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
							672	.	.	.	.	.	.	.						680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.									.	.	.	.	.
Query SS confidence		.	.	.	.	.									.	.	.	.	.
Query Sequence		.	.	.	.	.	G	L	K	A	Q	E	I	T	.	.	.	.	.	Q	K	T	L	S	Q	D	F	A	R	N	R	Q	I	H	N	C	W	L	I
Query Conservation		.	.	.	.	.									.	.	.	.	.
Alig confidence		.	.	.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		L	K	A	H	P	E	F	R	L	E	D	A	R	L	H	P	L	F	A	P	G	V	P	E	W	G	E	G	N	P	E	L	L	K	T	A	R	L
Template Known Secondary structure						T	T									S	T	T	S					G	G	G	T	T	T		G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions