Job Description P75864 Confidence 94.46% Date Thu Jan 5 12:15:14 GMT 2012 Rank 319 Aligned Residues 88 % Identity 16% Template c3lkzB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase Resolution 2.00 Å

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		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.																.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure																				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	A	G	L	.	G	G	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	L	T	G	R	A	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	Q	A	D	C	L	A	W	L	R	E
Query Conservation																				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Sequence		K	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	M	A	T	Q	K	R	V	Q	E	V	R	G	Y	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	P	G	H	E	E	P	Q	L	V	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	.	.	.	Y	R
Template Known Secondary structure							T		T	T								T	T		T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S								B	T	T	G	G	G						S			T	T	.	.	.	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.
		605	.	.	.	.	610	.	.	.	.	.	.		.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.		650	.	.	.	.	.	.
Predicted Secondary structure														.																																		.
Query SS confidence														.																																		.
Query Sequence		A	N	E	Q	F	D	L	I	F	I	D	P	.	P	T	F	S	N	S	K	R	M	E	D	A	F	D	V	Q	R	D	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	.	G	T	I	M	F	S	N
Query Conservation														.																																		.
Alig confidence														.			.					.	.	.	.							.																.		.	.
Template Conservation																	.					.	.	.	.							.																		.	.
Template Sequence		P	S	E	C	C	D	T	L	L	C	D	I	G	E	S	.	S	S	S	A	.	.	.	.	E	V	E	E	H	R	.	T	I	R	V	L	E	M	V	E	D	W	L	H	R	G	P	R	.	.	E	F	C	V
Template Known Secondary structure							S										.		S			.	.	.	.							.													T	T				.	.
Template Predicted Secondary structure																	.					.	.	.	.							.																		.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.					.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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