Job Description P75864 Confidence 100.00% Date Thu Jan 5 12:15:14 GMT 2012 Rank 3 Aligned Residues 364 % Identity 33% Template c3ldgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein smu.472; PDBTitle: crystal structure of smu.472, a putative methyltransferase complexed2 with sah Resolution 1.96 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	L	F	A	S	T	A	R	G	L	E	E	L	L	K	T	E	L	E	N	L	G	A	V	E	C	Q	V	V	Q	G	G	V	H	F	K	G	D	T	R	L	V	Y	Q	S	L	M	W	S	R	L	A	S	R	I	M	L	P	L	G	E	C	K	V	Y	S	D	L	D	L	Y	L	G	V	Q	A	I	N	W
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		F	N	L	V	A	T	A	A	A	G	I	E	A	V	V	G	K	E	L	R	N	L	G	L	D	.	C	Q	V	E	N	G	R	V	L	F	K	G	N	I	E	T	I	A	K	S	N	L	W	L	R	S	A	D	R	I	K	I	V	V	G	E	F	P	A	R	T	F	E	E	L	F	Q	G	V	Y	A	L	D	W
Template Known Secondary structure										T	T												T	T			.					T	T																			S	S		S												S	S											S		G
Template Predicted Secondary structure																											.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																																			.	.
Query SS confidence															.																																			.	.
Query Sequence		T	E	M	F	N	P	G	A	T	F	A	V	H	.	F	S	G	L	N	D	T	I	R	N	S	Q	Y	G	A	M	K	V	K	D	A	I	V	D	A	F	T	R	K	N	L	P	R	P	.	.	N	V	D	R	D	A	P	D	I	R	V	N	V	W	L	H	K	E	T	A	S	I	A	L	D	L	S	G	D	G
Query Conservation															.																																			.	.
Alig confidence															.																																			.	.
Template Conservation
Template Sequence		E	N	Y	L	P	L	G	C	Q	F	P	V	A	K	A	K	S	V	K	S	K	L	H	N	E	P	S	I	Q	G	I	T	K	K	A	I	V	K	K	L	Q	H	Y	F	H	R	P	D	S	V	P	L	P	E	N	G	P	E	F	K	I	E	I	S	L	L	K	D	Q	A	R	V	X	I	D	T	T	G	P	S
Template Known Secondary structure		G	G	T			T	T		B			B							S		S																							T	T			T	T	S						S		B									T	T								S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	R	G	Y	R	D	R	A	G	I	A	P	I	K	E	T	L	A	A	A	I	V	M	R	S	G	W	Q	P	G	T	P	L	L	D	P	M	C	G	S	G	T	L	L	I	E	A	A	M	L	A	T	D	R	A	P	G	L	H	R	G	R	W	G	F	S	G	W	A	Q	H	D	E	A	I	W	Q	E
Query Conservation
Alig confidence									.	.	.																																																					.
Template Conservation									.	.	.																																																					.
Template Sequence		L	F	K	R	G	Y	R	.	.	.	T	E	A	P	I	K	E	N	X	A	A	A	I	I	L	L	S	N	W	F	P	D	K	P	F	V	D	P	T	C	G	S	G	T	F	C	I	E	A	A	X	I	G	X	N	I	A	P	G	F	N	R	.	D	F	A	F	E	E	W	P	W	V	D	E	A	L	V	T	R
Template Known Secondary structure		T	T			S			.	.	.																	T	T			T	T	S					T	T		T	T	S											T	T			T	T	T	T		.			G	G	G	G		T	T	S
Template Predicted Secondary structure									.	.	.																																																					.
Template SS confidence
		164	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	A	E	A	Q	T	R	A	R	K	G	L	A	E	Y	S	S	H	F	Y	G	S	D	S	D	A	R	V	I	Q	R	A	R	T	N	A	R	L	A	G	I	G	E	L	I	T	F	E	V	K	D	V	A	Q	L	T	N	P	L	P	K	G	P	Y	G	T	V	L	S	N	P	P	Y	G	E	R	L	D	S
Query Conservation
Alig confidence												.	.	.																																															.	.	.
Template Conservation												.	.	.																																															.	.	.
Template Sequence		V	R	N	E	A	D	E	Q	A	D	.	.	.	Y	D	I	Q	L	D	I	S	G	F	D	F	D	G	R	X	V	E	I	A	R	K	N	A	R	E	V	G	L	E	D	V	V	K	L	K	Q	X	R	L	Q	D	F	K	T	N	.	.	.	K	I	N	G	V	L	I	S	N	P	P	Y	G	E	R	L	L	D
Template Known Secondary structure												.	.	.	T	T										S															T	T		T	T	T								G	G	G					.	.	.			S										T	T	T	T	S
Template Predicted Secondary structure												.	.	.																																															.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	A	L	I	A	L	H	S	L	L	G	R	I	M	K	N	Q	F	G	G	W	N	L	S	L	F	S	A	S	P	D	L	L	S	C	L	Q	L	R	A	D	K	Q	Y	K	A	K	N	G	P	L	D	C	V	Q	K	N	Y
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		D	K	A	V	D	I	L	Y	N	E	X	G	E	T	F	A	P	.	L	K	T	W	S	Q	F	I	L	T	N	D	T	D	F	E	Q	K	F	G	R	K	A	D	K	K	R	K	L	Y	N	G	S	L	K	V	D	L	Y	Q	F
Template Known Secondary structure																	T	T	.		T	T	S							S		T	T						T	S			S								T	T
Template Predicted Secondary structure																			.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions