Job Description P75864 Confidence 100.00% Date Thu Jan 5 12:15:14 GMT 2012 Rank 2 Aligned Residues 362 % Identity 33% Template c3k0bA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase; PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365 Resolution 1.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	A	S	T	A	R	G	L	E	E	L	L	K	T	E	L	E	N	L	G	A	V	E	C	Q	V	V	Q	G	G	V	H	F	K	G	D	T	R	L	V	Y	Q	S	L	M	W	S	R	L	A	S	R	I	M	L	P	L	G	E	C	K	V	Y	S	D	L	D	L	Y	L	G	V	Q	A	I	N	W	T
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		Q	L	V	A	T	A	A	S	G	L	E	A	I	V	G	K	E	V	A	R	L	G	Y	D	.	P	K	V	E	N	G	K	V	Y	F	E	G	D	L	S	A	I	A	R	A	N	L	W	L	R	V	A	D	R	V	K	I	V	V	G	V	F	K	A	T	T	F	D	E	L	F	E	K	T	K	A	L	P	W	E
Template Known Secondary structure									T	T												T	T			.					T	T																			S	S		S												S	S										T	S		G	G
Template Predicted Secondary structure																										.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	F	N	P	G	A	T	F	A	V	H	F	S	G	L	N	D	T	I	R	N	S	Q	Y	G	A	M	K	V	K	D	A	I	V	D	A	F	T	R	K	N	L	P	R	P	N	V	D	R	D	A	P	D	I	R	V	N	V	W	L	H	K	E	T	A	S	I	A	L	D	L	S	G	D	G	L	H	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	L	P	L	D	A	Q	F	P	V	A	G	K	S	V	K	S	T	L	Y	S	V	P	D	C	Q	A	I	V	K	K	A	I	V	N	R	V	S	E	K	Y	R	R	S	G	R	L	X	E	T	G	A	L	F	K	L	E	V	S	I	L	K	D	E	V	T	L	T	I	D	T	S	G	A	G	L	H	K	R
Template Known Secondary structure		G	T			T	T		B									S	S	S																							T	T	T		T	T			S		S	S	B									T	T								S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	R	D	R	A	G	I	A	P	I	K	E	T	L	A	A	A	I	V	M	R	S	G	W	Q	P	G	T	P	L	L	D	P	M	C	G	S	G	T	L	L	I	E	A	A	M	L	A	T	D	R	A	P	G	L	H	R	G	R	W	G	F	S	G	W	A	Q	H	D	E	A	I	W	Q	E	V	K	A	E
Query Conservation
Alig confidence																																																												.
Template Conservation																																																												.
Template Sequence		G	Y	R	L	A	Q	G	S	A	P	I	K	E	T	X	A	A	A	L	V	L	L	T	S	W	H	P	D	R	P	F	Y	D	P	V	C	G	S	G	T	I	P	I	E	A	A	L	I	G	Q	N	I	A	P	G	F	N	R	.	E	F	V	S	E	T	W	D	W	X	P	K	Q	V	W	A	D	A	R	Q	E
Template Known Secondary structure		S	T	T	T	T	S		S		S													S				T	T	S					T	T		T	T	S											T	T			T	T	T	T	S	.			G	G	G	G		T	T	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	T	R	A	R	K	G	L	A	E	Y	S	S	H	F	Y	G	S	D	S	D	A	R	V	I	Q	R	A	R	T	N	A	R	L	A	G	I	G	E	L	I	T	F	E	V	K	D	V	A	Q	L	T	N	P	L	P	K	G	P	Y	G	T	V	L	S	N	P	P	Y	G	E	R	L	D	S	E	P	A	L
Query Conservation
Alig confidence								.	.	.																																															.	.	.
Template Conservation								.	.	.																																															.	.	.
Template Sequence		A	E	D	L	A	N	.	.	.	Y	D	Q	P	L	N	I	I	G	G	D	I	D	A	R	L	I	E	I	A	K	Q	N	A	V	E	A	G	L	G	D	L	I	T	F	R	Q	L	Q	V	A	D	F	Q	T	E	.	.	.	D	E	Y	G	V	V	V	A	N	P	P	Y	G	E	R	L	E	D	E	E	A	V
Template Known Secondary structure								.	.	.	T	T										S															T	T		T	T		S							G	G	G					.	.	.			S												S
Template Predicted Secondary structure								.	.	.																																															.	.	.
Template SS confidence
		243	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	H	S	L	L	G	R	I	M	K	N	Q	F	G	G	W	N	L	S	L	F	S	A	S	P	D	L	L	S	C	L	Q	L	R	A	D	K	Q	Y	K	A	K	N	G	P	L	D	C	V	Q	K	N	Y
Query Conservation
Alig confidence															.																																			.	.	.	.
Template Conservation															.																																			.	.	.	.
Template Sequence		R	Q	L	Y	R	E	X	G	I	V	Y	K	R	.	X	P	T	W	S	V	Y	V	L	T	S	Y	E	L	F	E	E	V	Y	G	K	K	A	T	K	K	R	K	L	Y	R	T	D	L	.	.	.	.	Y	Q	Y
Template Known Secondary structure														T	.		T	T										T	T						T	S			S											.	.	.	.
Template Predicted Secondary structure															.																																			.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.					.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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