Job Description P75864 Confidence 98.84% Date Thu Jan 5 12:15:14 GMT 2012 Rank 168 Aligned Residues 161 % Identity 9% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

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		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.						.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																							.																															.	.	.	.	.																			.
Query SS confidence																							.																															.	.	.	.	.																			.
Query Sequence		G	K	N	Q	Y	Q	K	L	G	E	K	G	E	F	L	E	V	T	E	Y	N	.	A	H	L	W	V	N	L	T	D	Y	L	D	T	G	L	F	L	D	H	R	I	A	R	R	M	L	G	Q	M	S	.	.	.	.	.	K	G	K	D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	.	A	G	L	G
Query Conservation																							.																															.	.	.	.	.																			.
Alig confidence																							.																															.	.	.	.	.																			.
Template Conservation
Template Sequence		S	V	I	E	L	E	A	D	S	Y	T	T	D	G	W	L	I	S	I	N	G	V	P	S	S	H	I	V	L	G	Q	P	Q	A	L	E	F	E	Y	X	R	W	I	A	T	G	A	R	A	F	I	D	A	H	Q	D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y
Template Known Secondary structure		S								S	S	S	T	T							T	T								T	T		T	T				S																		S		G	G	G							S		G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		G	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	L	T	G	R	A	H	R	L	I	Q	A	D	C	L	A	W	L	R	E	.	A	N	E	Q	F	D	L	I	F	I	D	P	P	T	F	S	N	S	K	R	M	E	D	A	F	D	V	Q	R	D	H	L	A	L
Query Conservation																																															.
Alig confidence																											.	.																			.																									.	.	.	.	.	.	.
Template Conservation																											.	.																																												.	.	.	.	.	.	.
Template Sequence		P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	P	.	.	R	A	P	R	V	K	I	R	V	D	D	A	R	X	V	A	E	S	F	T	P	A	S	R	D	V	I	I	R	D	V	F	A	G	A	I	T	P	Q	N	F	T	T	.	.	.	.	.	.	.	V	E	F
Template Known Secondary structure		T	T								S												S				.	.		T	T	T						S								T			T	T										S	T	T	S				G	G	G	S	B	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.																																												.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	H	C	H	R	G	L	A	P	G	G	L	Y	V	A	N	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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