 |
Job Description | P75864 | Confidence | 99.54% | Date | Thu Jan 5 12:15:14 GMT 2012 |
Rank | 43 | Aligned Residues | 131 |
% Identity | 21% | Template | c3gdhC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:trimethylguanosine synthase homolog; |
PDBTitle: methyltransferase domain of human trimethylguanosine2 synthase 1 (tgs1) bound to m7gtp and adenosyl-homocysteine3 (active form)
|
Resolution | 2.00 Å |
|
 |
  |   |
519 | 520 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | G | L | F | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | R | I | A | R | R | M | L | G | Q | M | S | K | G | K | D | F | L | N | L | F | S | Y | T | G | S | A | T | V | H | A | G | L | G | G | A | R | S | T | T | T | V | D | M | S | R | T | Y | L | E | W | A | E | R | N | L | R | L | N | G | L |
Query Conservation |   |
  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |   | . |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
D | D | G | I | K | L | D | R | E | G | W | F | S | V | T | P | E | K | I | A | E | H | I | A | G | R | V | S | Q | S | F | K | C | D | V | V | V | D | A | F | C | G | V | G | G | N | T | I | Q | F | A | L | T | G | M | R | . |
V | I | A | I | D | I | D | P | V | K | I | A | L | A | R | N | N | A | E | V | Y | G | I |
Template Known Secondary structure |   |
G | G | T |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  |  |  | T | T |
|  | . |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
659 | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | |
. | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . |
  |
  |   |
587 | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | |
|
|
|
. | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | R | A | H | R | L | I | Q | A | D | C | L | A | W | L | R | E | A | N | E | Q | F | D | L | I | F | I | D | P | P | T | F | S | N | S | K | R | M | E | D | A | F | D | V | Q | R | . |
. |
. |
. |
D | H | L | A | L | M | K | D | L | K | R | L | L | R | A | G | G | T | I | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
| . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
A | D | . |
K | I | E | F | I | C | G | D | F | L | L | L | A | S | F | L | . |
. |
K | A | D | V | V | F | L | S | P | P | W | G | G | P | D | Y | A | T | A | E | T | F | D | I | R | T | M | M | S | P | D | G | F | E | I | F | R | L | S | K | K | I | T | N | N | I | V | Y | F | L |
Template Known Secondary structure |   |
G | G | . | G |  |  |  |  |  | S |
|  |  |  |  | G | G | G |
| . | . |
|
| S |  |  |  |  |
|
|
|
|
| S | G | G | G | G | G | S | S | S | B |
| T | T | T | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . |
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
738 | . | |
740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | |
|
. | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|