Return to main results Retrieve Phyre Job Id

Job DescriptionP75864
Confidence98.35%DateThu Jan 5 12:15:14 GMT 2012
Rank249Aligned Residues129
% Identity19%Templatec3fteA_
PDB info PDB header:transferase/rnaChain: A: PDB Molecule:dimethyladenosine transferase; PDBTitle: crystal structure of a. aeolicus ksga in complex with rna
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180.........190.........200.........210.........220.........230.........240.........250..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA
Query Conservation 









 



     


















   



 
  
 
  
   
   
  
  

         
Alig confidence 



































...........................................
Template Conservation 

  
   

        
 




 
 
 

  

........................................... 
Template Sequence  VSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Q
Template Known Secondary structure 



TT
S

SST...........................................T
Template Predicted Secondary structure 













...........................................
Template SS confidence 















































































   14.....20.........30.........40......... 50
 
   253......260.........270.........280.........290.........300.........310.........320.........330..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRI
Query Conservation       
 
 
 
  

  

 

  


   
     
   
  
      
 











    
  

  

  
Alig confidence 





















.....

















.














...........







Template Conservation       
 




      

  .....      
   
       .       

 



 ...........


 

  
Template Sequence  HPLKKLYVIELDREMVENLKSI. . . . . GDERLEVINEDASKFPFC. SLGKELKVVGNLPYN. . . . . . . . . . . VASLIIEN
Template Known Secondary structure  S

S
S
TTTGGGG
SS.....

TTB

B
S
TTS

GG.GT
SSB

TT...........T
Template Predicted Secondary structure 




.....








.









...........
Template SS confidence 















































































   51........60.........70.. .......80.........90 .........100..... ....110...
 
   333......340.........350.........360...
Predicted Secondary structure 











Query SS confidence 






























Query Sequence  MKNQFGGWNLSLFSASPDLLSCLQLRADKQY
Query Conservation 

    

   


    
 
 


      
Alig confidence 






















..





Template Conservation 

         
 
 




 

.. 
   
Template Sequence  TVYNKDCVPLAVFMVQKEVAEKL. . QGKKDT
Template Known Secondary structure  TTGGG
S

..SSS

Template Predicted Secondary structure 






..





Template SS confidence 






























   114.....120.........130...... ...140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions