Job Description P75864 Confidence 98.97% Date Thu Jan 5 12:15:14 GMT 2012 Rank 148 Aligned Residues 135 % Identity 17% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.			.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.		.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																					.																											.	.																						.
Query SS confidence																					.																											.	.																						.
Query Sequence		K	D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	A	G	L	.	G	G	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	.	.	G	L	T	G	R	A	H	R	L	I	Q	A	D	C	L	A	W	L	R	E	A	.	N	E	Q	F	D	L	I	F	I	D
Query Conservation																					.																											.	.																						.
Alig confidence																					.																											.	.																						.
Template Conservation
Template Sequence		E	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F	V	R	Q	T	P	D	N	T	Y	D	V	V	I	I	D
Template Known Secondary structure										T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S								T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.						.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		P	P	T	F	S	N	S	K	R	M	E	D	A	F	D	V	Q	R	D	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F	S	N	N	K	R	G	F	R	M	D	L	.	.	.	.	.	D	G	L	A	K	L	G	L	K	A	Q	E	I	T	Q	K	T	L	S
Query Conservation																																																				.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	D	P	A	S	K	.	.	.	.	.	.	.	.	.	.	L	F	G	E	A	F	Y	K	D	V	L	R	I	L	K	P	D	G	I	C	C	N	Q	G	E	S	I	W	L	D	L	E	L	I	E	K	X	S	R	F	I	R	E	T	G	F	A	S	V	Q	Y	A	L	X	H	V	P
Template Known Secondary structure			S						.	.	.	.	.	.	.	.	.	.	S	S																									T	T	T																T		S										T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions