|   |
518 | . | 520 | . | . | . | . | . | . | |
|
. | . | . | 530 | . | . | . | . | . | . | . | |
|
|
. | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | |
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
L | D | T | G | L | F | L | D | H | . |
. |
R | I | A | R | R | M | L | G | Q | M | S | . |
. |
. |
K | G | K | D | F | L | N | L | F | S | Y | T | G | S | A | T | V | H | A | G | L | G | G | A | R | S | T | T | T | V | D | M | S | R | T | Y | L | E | W | A | E | R | N | L | R | L | N | G | L | T | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |
|
|
|
|
|
|   | . | . |
|   |   |
|   |   |   |   |   |   |
| . | . | . |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |
|
|   |   |
|   | . |   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | H | I | S | F | H | Q | E | Q | G | H | Q | L | L | K | K | H | L | D | T | F | L | K | G | Q | S | G | L | R | V | F | F | P | L | C | G | K | A | I | E | M | K | W | F | A | D | R | G | H | . |
T | V | V | G | V | E | I | S | E | I | G | I | R | E | F | F | A | E | Q | N | L | S | Y | T | E | E | P | L | A | E |
Template Known Secondary structure |   |
T |
|
| T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| S |
|  |  |  |  | T | T |
| T | T |
| T |  |  |  |  |  |  |  | T | T |
| . |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
588 | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | A | H | R | L | I | Q | A | D | C | L | A | W | L | R | E | A | N | E | Q | F | D | L | I | F | I | D | P | P | T | F | S | N | S | K | R | M | E | D | A | F | D | V | Q | R | D | H | L | A | L | M | K | D | L | K | R | L | L | R | A | G | G | T | I | M | F | S | N | . |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |
|   | . |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |
Template Sequence |   |
I | A | G | A | K | V | F | K | S | S | S | G | S | I | S | L | Y | C | C | S | I | F | D | L | P | R | A | N | I | G | K | F | D | R | I | W | D | R | G | A | L | V | A | I | N | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | D | H | D | R | Y | A | D | I | I | L | S | L | L | R | K | E | F | Q | Y | L | V | A | V | L |
Template Known Secondary structure |   |
S | T | T |
|  |  |  |  |  | T | T | S | S |  |  |  |  |  | S |
| T | T | T | G | G | G | G |
|
|
|
|  |  |  |  |  |  | S | S | S | T | T | T | S |
| G | . | . | . | . | . | . | . | . | . | G | G |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
  |
  |   |
|
|
|
|
|
|
|
657 | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | |
|
|
. | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | |
|
|
|
. | . | . | . | 700 | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
N | K | R | G | F | R | M | D | L | D | G | L | A | K | . |
. |
. |
L | G | L | K | A | Q | E | I | T | Q | K | T | L | S | Q | D | F | A | R | N | R | Q | I | H | N | . |
. |
. |
. |
C | W | L | I | T | A |
Query Conservation |   |
. | . | . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
|   |   |   |
|
|   | . | . | . | . |   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |
|   |   |
Template Sequence |   |
S | Y | D | P | T | K | H | A | G | P | P | F | Y | V | P | S | A | E | L | K | R | L | F | G | T | K | C | S | M | Q | C | L | E | E | V | D | A | L | E | E | R | H | K | A | W | G | L | D | Y | L | F | E | K | L | Y | L | L | T | E |
Template Known Secondary structure |   |
 |
|
| G | G | G |
|
|
| S | S |
|
|
|
|  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | T | T | T |
| S |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |