Job Description P75864 Confidence 99.78% Date Thu Jan 5 12:15:14 GMT 2012 Rank 26 Aligned Residues 166 % Identity 23% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	F	L	E	V	T	E	Y	N	A	H	L	W	V	N	L	T	D	Y	L	D	T	G	L	F	L	D	H	R	I	A	R	R	M	L	G	Q	M	S	K	G	K	D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	A	G	L	G	G	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A
Query Conservation
Alig confidence																													.																																			.
Template Conservation																													.																																			.
Template Sequence		K	E	F	I	R	E	R	L	D	D	V	D	Y	L	I	H	P	N	S	F	F	Q	T	N	S	Y	Q	.	A	V	N	L	V	R	K	V	S	E	L	V	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	.	G	F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A
Template Known Secondary structure			S							T	T							T	T	S				S	B				.														S	S						T		T	T	T								T	T	.	T								S
Template Predicted Secondary structure																													.																																			.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.			.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		E	R	N	L	R	L	N	G	L	T	G	R	A	H	R	L	I	Q	A	D	C	L	A	W	L	R	E	A	N	E	Q	F	D	L	I	F	I	D	P	P	T	F	S	N	S	K	R	M	E	D	A	F	D	V	Q	R	D	.	.	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F	S
Query Conservation																																																											.	.
Alig confidence												.	.									.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.												.
Template Conservation												.	.									.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		R	R	N	V	E	I	N	N	V	D	.	.	A	E	F	E	V	A	S	D	.	.	.	.	R	E	V	S	V	K	G	F	D	T	V	I	V	D	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	.	K	P	G	V	I	V	Y	V	S
Template Known Secondary structure								T	T			.	.								T	.	.	.	.	T	T				T	T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S												.			S
Template Predicted Secondary structure												.	.									.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.																.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	K	R	G	F	R	M	D	L	D	G	L	A	K	L	G	L	K	A	Q	E	I	T	Q	K	T	L	S	Q	D	F	A	R	N	R	Q	I
Query Conservation
Alig confidence															.	.	.											.	.	.
Template Conservation															.	.	.											.	.	.
Template Sequence		C	N	P	E	T	F	A	R	D	V	K	M	L	.	.	.	D	Y	R	I	D	E	I	V	A	L	.	.	.	D	M	F	P	H	T	P	H	V
Template Known Secondary structure		S												T	.	.	.	T										.	.	.			S	T	T	S	S
Template Predicted Secondary structure															.	.	.											.	.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.				380	.	.	.	.	.	.	.	.	.				390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions