Job Description P75864 Confidence 98.97% Date Thu Jan 5 12:15:14 GMT 2012 Rank 149 Aligned Residues 110 % Identity 16% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.			.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.		.	.	610	.	.	.
Predicted Secondary structure																							.																												.	.																							.
Query SS confidence																							.																												.	.																							.
Query Sequence		K	G	K	D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	A	G	L	.	G	G	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	.	.	L	T	G	R	A	H	R	L	I	Q	A	D	C	L	A	W	L	R	E	A	N	E	.	Q	F	D	L	I	F
Query Conservation																							.																												.	.																							.
Alig confidence																							.																												.	.																							.
Template Conservation
Template Sequence		N	P	K	K	V	L	V	I	G	G	G	D	G	G	V	L	R	E	V	A	R	H	A	S	I	E	Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	I	G	D	G	V	A	F	L	K	N	A	A	E	G	S	Y	D	A	V	I
Template Known Secondary structure		S								S		S	S	S							T	T		T	T																						T	T	T	G	G	G	T	T		T	T						S								S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	P	P	T	F	S	N	S	K	R	M	E	D	A	F	D	V	Q	R	D	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F
Query Conservation
Alig confidence							.	.													.	.	.	.	.
Template Conservation							.	.													.	.	.	.	.
Template Sequence		V	D	S	S	D	.	.	P	I	G	P	A	K	E	L	F	E	K	P	.	.	.	.	.	F	F	Q	S	V	A	R	A	L	R	P	G	G	V	V	C	T
Template Known Secondary structure							.	.	S	S	S	G	G	G	G	G	G	S			.	.	.	.	.
Template Predicted Secondary structure							.	.													.	.	.	.	.
Template SS confidence
		200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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