Job Description P75864 Confidence 99.48% Date Thu Jan 5 12:15:14 GMT 2012 Rank 52 Aligned Residues 148 % Identity 20% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		520	.	.	.	.	.	.	.	.				.	530	.	.	.	.	.	.	.			.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560		.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
Predicted Secondary structure											.	.	.										.	.																								.
Query SS confidence											.	.	.										.	.																								.
Query Sequence		T	G	L	F	L	D	H	R	I	.	.	.	A	R	R	M	L	G	Q	M	S	.	.	K	G	K	D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	A	G	L	G	G	.	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	L	T	G	R	A	H	R	L
Query Conservation											.	.	.										.	.																								.
Alig confidence											.	.	.										.	.																								.																											.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		P	G	V	F	S	R	D	G	L	D	V	G	S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	.	.	E	G	E	V
Template Known Secondary structure		T	T		T	T	S	S	S												S		T	T			S	B			B	T	T		T	T	S											T	T		B						S	B														T	T		.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	A	D	C	L	A	W	L	R	E	A	N	E	Q	F	D	L	I	F	I	D	P	P	T	F	S	N	S	K	R	M	E	D	A	F	D	V	Q	R	D	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F	S	N	N	K	R	G	F	R	M	D	L	D	G	L	A	K	L	G	L
Query Conservation
Alig confidence											.	.	.																.	.	.	.	.	.																																.	.
Template Conservation											.	.	.																.	.	.	.	.	.																																.	.
Template Sequence		F	A	S	N	V	F	S	E	V	.	.	.	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D	.	.	.	.	.	.	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	.	.	A	F	L	P	Y	P	D	V	L	D	E	T	F	G
Template Known Secondary structure					S	T	T	T	T		.	.	.		S													S	.	.	.	.	.	.	S	S															G	G	G													.	.	T	T	S	S										S
Template Predicted Secondary structure											.	.	.																.	.	.	.	.	.																																.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.							.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.
		674	.	.	.	.	.	680	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	Q	E	I	T	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	E	V	I	A	Q	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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