Job Description P75864 Confidence 99.29% Date Thu Jan 5 12:15:14 GMT 2012 Rank 77 Aligned Residues 183 % Identity 15% Template c2frxD_ PDB info PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli Resolution 2.90 Å

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		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.						.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.			560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																							.	.
Query SS confidence																									.	.	.	.	.																							.	.
Query Sequence		T	D	Y	L	D	T	G	L	F	L	D	H	R	I	A	R	R	M	L	G	Q	M	S	.	.	.	.	.	K	G	K	D	F	L	N	L	F	S	Y	T	G	S	A	T	V	H	A	G	L	G	.	.	G	A	R	S	T	T	T	V	D	M	S	R	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	L	T
Query Conservation																									.	.	.	.	.																							.	.
Alig confidence																									.	.	.	.	.																							.	.
Template Conservation
Template Sequence		T	A	E	H	L	S	G	L	F	Y	I	Q	E	A	S	S	X	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	R	V	X	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	X	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	S	R	C	G	I	S
Template Known Secondary structure		S					T	T	S																	T	T	T				S					S	S		T	T	S										T	T	T		S							S	S															T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.						.	.	620	.	.	.	.	.							.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.									.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.									.	.	.	.	.	.
Query Sequence		G	R	A	H	R	L	I	Q	A	D	C	L	A	W	L	R	E	A	N	E	Q	F	D	L	I	F	I	D	P	P	.	.	.	.	.	T	F	S	N	S	K	R	M	.	.	.	.	.	.	E	D	A	F	D	V	Q	R	D	H	L	A	L	M	K	D	L	K	R	L	L	R	A	G	G	T	I	M	F	S	N
Query Conservation																																.	.	.	.	.									.	.	.	.	.	.
Alig confidence		.	.																													.	.	.	.	.									.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	N	V	A	L	T	H	F	D	G	R	V	F	G	A	A	V	P	E	X	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L	V	Y	S	T
Template Known Secondary structure		.	.	S								S	T	T					S	T	T														G	G	G	G	G	T		T	T	S	S	S	S																							T
Template Predicted Secondary structure		.	.
Template SS confidence
				169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		657	.	.	660	.	.	.	.	.	.	.					.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		N	K	R	G	F	R	M	D	L	D	G	.	.	.	.	L	A	K	L	G	L	K	A	Q	E	I	T	Q	K	T	L	S	Q	D	F	A	R	N	R	Q	I	H	N	C	W	L	I
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		C	T	L	N	Q	E	E	N	E	A	V	C	L	W	L	K	E	T	Y	P	D	A	V	E	F	L	P	L	G	D	L	F	P	G	A	N	K	A	L	T	E	E	G	F	L	H	V
Template Known Secondary structure		S			S	S	T	T	T											S	T	T	T							T	T	S	S	T	T	G	G	G	G	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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