Job Description P75864 Confidence 98.87% Date Thu Jan 5 12:15:14 GMT 2012 Rank 163 Aligned Residues 195 % Identity 14% Template c2c5sA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain Resolution 2.5 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure															.	.	.	.																	.	.	.
Query SS confidence															.	.	.	.																	.	.	.
Query Sequence		R	G	L	E	E	L	L	K	T	E	L	E	N	.	.	.	.	L	G	A	V	E	C	Q	V	V	Q	G	G	V	H	F	K	.	.	.	G	D	T	R	L	V	Y	Q	S	L	M	W	S	R	L	A	S	R	I	M	L	P	L	G	E	C	K	V	Y	S	D	L	D	L	Y	L	G	V	Q	A	I	N	W	T
Query Conservation															.	.	.	.																	.	.	.
Alig confidence															.	.	.	.																	.	.	.																								.				.																.
Template Conservation																																																													.				.																.
Template Sequence		S	K	F	V	S	T	L	K	D	N	V	K	F	K	L	K	K	F	P	N	I	K	I	D	A	T	H	D	R	M	Y	I	Q	L	N	G	E	D	H	E	A	V	S	E	R	L	K	D	V	F	G	I	H	K	F	N	L	A	M	.	K	V	P	.	S	E	L	E	D	I	K	K	G	A	L	A	A	F	L	.
Template Known Secondary structure																T	T	T	S	T	T							S	S							T	T											T	T		T	T									.				.	S	S														.
Template Predicted Secondary structure																																																													.				.																.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.
Predicted Secondary structure																					.																																																					.	.	.	.
Query SS confidence																					.																																																					.	.	.	.
Query Sequence		E	M	F	N	P	G	A	T	F	A	V	H	F	S	G	L	N	D	T	.	I	R	N	S	Q	Y	G	A	M	K	V	K	D	A	I	V	D	A	F	T	R	K	N	L	P	R	P	N	V	D	R	D	A	P	D	I	R	V	N	V	W	L	H	K	E	T	A	S	I	A	L	D	.	.	.	.	L	S	G	D
Query Conservation																					.																																																					.	.	.	.
Alig confidence																					.																				.	.	.	.	.																													.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		Q	V	K	G	D	V	K	T	F	K	I	T	V	H	R	S	Y	K	H	F	P	M	R	T	M	E	L	L	P	E	I	G	G	H	I	L	E	N	T	.	.	.	.	.	E	D	I	T	V	D	V	H	N	P	D	V	N	V	R	V	E	I	R	S	G	Y	S	Y	I	M	C	D	E	R	M	G	A	G	G	L
Template Known Secondary structure		T			S														T	T		S	S															T	T	S	.	.	.	.	.	S	S					S	S	S		S									S	S														S	B
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	H	L	R	G	Y	R	D	R	A	G	I	A	P	I	K	E	T	L	A	A	A	I	V	M	R	S	G	W	Q	P	G	T	P	L	L	D	P	M	C	G	S	G	T	L	L	I	E	A	A	M	L	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	G	V	G	G	K	V	M	V	L	L	S	G	G	I	D	S	P	V	A	A	Y	L	T	M	K	R	G	V	S	V	E	A	V	H	F	H	S	P	P	F	T	S	E	R	A	K	Q	K	V	I	D	L	A
Template Known Secondary structure			T	T	T	T									S	S	S												B	T											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions