Phyre 2 alignment of P75864 with c1x0lB

Job Description P75864
Confidence 31.15% Date Thu Jan 5 12:15:14 GMT 2012

Rank 385 Aligned Residues 59

% Identity 17% Template c1x0lB_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:homoisocitrate dehydrogenase; PDBTitle: crystal structure of tetrameric homoisocitrate dehydrogenase from an2 extreme thermophile, thermus thermophilus

Resolution 1.85 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.								.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600		.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																														.
Query SS confidence																		.	.	.	.	.	.	.																														.
Query Sequence	H	A	G	L	G	G	A	R	S	T	T	T	V	D	M	S	R	.	.	.	.	.	.	.	T	Y	L	E	W	A	E	R	N	L	R	L	N	G	L	T	G	R	A	H	R	L	I	Q	A	D	C	L	A	.	W	L	R	E	A	N	E	Q	F	D	L	I	F	I	D
Query Conservation																		.	.	.	.	.	.	.																														.
Alig confidence																		.	.	.	.	.	.	.												.	.																	.
Template Conservation																																				.	.
Template Sequence	I	A	E	G	R	P	R	K	T	L	H	I	A	H	K	A	N	V	L	P	L	T	Q	G	L	F	L	D	T	V	K	E	V	A	K	.	.	D	F	P	L	V	N	V	Q	D	I	I	V	D	N	C	A	M	Q	L	V	M	R	P	E	R	F	D	V	I	V	T	T
Template Known Secondary structure				T	S	T	T									T	T	T		T	T														T	.	.	T		T	T	S																		G	G	G		S
Template Predicted Secondary structure																																				.	.
Template SS confidence
	157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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