Job Description P04994 Confidence 92.48% Date Thu Jan 5 10:58:33 GMT 2012 Rank 46 Aligned Residues 70 % Identity 17% Template d2pi2a1 SCOP info OB-fold Nucleic acid-binding proteins Single strand DNA-binding domain, SSB Resolution 2.00

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		M	G	Q	V	W	I	S	G	E	I	S	N	F	T	Q	P	A	S	G	H	W	Y	F	T	L	K	D	D	T	A	Q	.	V	R	C	A	M	F	R	N	S	N	R	R	V	T	F	R	P	Q	H	G	Q	Q	V	L	V	R	A	N	I	T	L	Y	E	P	R	G	D	Y	Q	I	I	V	E	S	M	Q	P
Query Conservation																																	.
Alig confidence																	.																.									.	.	.	.	.																				.	.
Template Conservation																	.																									.	.	.	.	.																				.	.
Template Sequence		I	S	Q	V	T	I	V	G	I	I	R	H	A	E	K	.	A	P	T	N	I	V	Y	K	I	D	D	M	T	A	A	P	M	D	V	R	Q	W	V	D	.	.	.	.	.	N	T	V	V	P	P	E	T	Y	V	K	V	A	G	H	L	R	S	F	.	.	Q	N	K	K	S	L	V	A	F	K	I	M	P
Template Known Secondary structure			S														.		S	S									S	S	S	S										.	.	.	.	.						T	T													.	.	T	T
Template Predicted Secondary structure																	.																									.	.	.	.	.																				.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions