Return to main results Retrieve Phyre Job Id

Job DescriptionP04994
Confidence76.09%DateThu Jan 5 10:58:33 GMT 2012
Rank177Aligned Residues91
% Identity19%Templated1rvv1_
SCOP infoLumazine synthase Lumazine synthase Lumazine synthase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141....... .150.........160.... .....170.........180.........190.........200.. .......210
Predicted Secondary structure 

.....



.












....




Query SS confidence 







. . . . .















.





































. . . .







Query Sequence  CVGVITSK. . . . . TGAALHDILHVLKRRD. PSLPVIIYPAAVQGDDAPGQIVRAIELANQRNECDVLI. . . . VGRGGGSL
Query Conservation   
 



 .....  

  
       
 .      
    


  
   
  

         
 

....
 




 
Alig confidence 







.....















.











.....




















....







Template Conservation 




 
 

  
   

 

   
   
     
 
  


.....
 


 
   
      



 

 





 
Template Sequence  KIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPG. . . . . AFEIPFAAKKMAETKKYDAIITLGTVIRGATTH
Template Known Secondary structure 
STTTT

GGGSS.....GGGTS

S

SSS
Template Predicted Secondary structure 







.....









Template SS confidence 















































































   14.....20.........30.........40.........50..... ....60.........70.........80........
 
   211........220...... ...230......
Predicted Secondary structure 


.




Query SS confidence 















.









Query Sequence  EDLWSFNDERVARAIF. TSRIPVVSAV
Query Conservation 


  

   




 .   






Alig confidence 















.









Template Conservation   
 
   
  

   

    

  

Template Sequence  YDYVCNEAAKGIAQAANTTGVPVIFGI
Template Known Secondary structure 
S
Template Predicted Secondary structure 



Template SS confidence 


























   8990.........100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions