|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
L | P | S | Q | S | P | A | I | F | T | V | S | R | L | N | Q | T | V | . |
. |
. |
. |
R | L | L | L | E | H | E | M | G | Q | V | W | I | S | G | E | I | S | N | F | T | Q | P | A | S | G | H | W | Y | F | T | L | K | D | D | T | A | Q | V | R | C | A | M | F | R | N | S | N | R | R | V | T | F | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |
| . | . | . | . |
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
|
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|   |   |   | . |
|   |   |
|
|
|   |
|   |   |
|
|
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | P | N | D | F | R | R | D | H | T | S | D | Q | L | H | E | E | F | D | A | K | D | N | Q | E | L | E | S | L | N | I | E | V | S | V | A | G | R | M | M | T | R | . |
R | I | M | G | K | A | S | F | V | T | L | Q | D | V | G | G | R | I | Q | L | Y | V | A | R | D | S | L | P | E | G | V | Y | N | D | Q | F | K |
Template Known Secondary structure |   |
S |
|
|
|
|
|
| S |
|
|  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T | T | S | S | T | T |  |  |  |  | T | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | Q | H | G | Q | Q | V | L | V | R | A | N | I | T | L | Y | E | P | R | G | D | Y | Q | I | I | V | E | S | M |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|   |
|   |
|   |
|   | . |   |
|   |
|
|
|
|
|
|   |   |   |   |   |
Template Sequence |   |
K | W | D | L | G | D | I | I | G | A | R | G | T | L | F | . |
K | T | Q | T | G | E | L | S | I | H | C | T | E | L |
Template Known Secondary structure |   |
G |
|
| T | T |
|  |  |  |  |  |  |  |  |  | . |  |
| T | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |