Job Description P04994 Confidence 72.67% Date Thu Jan 5 10:58:33 GMT 2012 Rank 186 Aligned Residues 112 % Identity 17% Template d1dbqa_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.20

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		140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure											.																.	.
Query SS confidence											.																.	.
Query Sequence		H	C	V	G	V	I	T	S	K	.	T	G	A	A	L	H	D	I	L	H	V	L	K	R	R	.	.	D	P	S	L	P	V	I	I	Y	P	A	A	V	Q	G	D	D	A	P	G	Q	I	V	R	A	I	E	L	A	N	Q	R	N	E	C	D	V	L	I	V	G	R	G	G	G	S	L	E	D	L	W	S	F
Query Conservation											.																.	.
Alig confidence											.																.	.												.	.	.	.																			.												.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.																			.												.	.	.	.	.	.	.	.
Template Sequence		K	S	I	G	L	L	A	T	S	S	E	A	A	Y	F	A	E	I	I	E	A	V	E	K	N	C	F	Q	K	G	Y	T	L	I	L	G	N	A	.	.	.	.	W	N	N	L	E	K	Q	R	A	Y	L	S	M	M	A	Q	K	R	.	V	D	G	L	L	V	M	C	S	E	Y	.	.	.	.	.	.	.	.
Template Known Secondary structure									S		T	T	S																		T									.	.	.	.	T	T															T	T	.		S							S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																			.												.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	E	R	V	A	R	A	I	F	T	S	R	I	P	V	V	S	A	V	G	H	E	T	D	V	T	I	A	D	F	V	A	D	L	R	A	P	T	P	S	A	A	A	E	V	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	P	L	L	A	M	L	E	E	Y	R	H	I	P	M	V	V	M	D	W	G	E	A	K	A	D	F	T	D	A	V	I	D	N	A	F	E	G	G	Y	M	A	G	R	Y	L	I
Template Known Secondary structure												T	T	T	S								S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions