|   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | V | G | V | I | T | S | K | T | G | A | A | L | H | D | I | L | H | V | L | K | R | R | . |
. |
D | P | S | L | P | V | I | I | Y | P | A | A | V | Q | G | D | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | G | Q | I | V | R | A | I | E | L | A | N | Q | R | N | E | C | D | V | L | I | V | G | R | G | G | G | S |
Query Conservation |   |
  |
|   |
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
| . | . |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
| . |   |
|
|
|
|
| . | . | . | . | . | . |
Template Sequence |   |
R | I | Q | V | I | N | P | N | T | S | L | A | X | T | E | T | I | G | A | A | A | R | A | V | A | A | P | G | T | E | I | L | A | V | C | P | R | A | G | V | P | S | I | E | G | H | F | D | E | A | I | A | A | V | G | V | L | E | Q | I | R | A | G | R | E | Q | G | . |
V | D | G | H | V | I | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |
|
| S | S | S |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | |
|
|
|
|
|
  |
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | D | L | W | S | F | N | D | E | R | V | A | R | A | I | F | T | S | R | I | P | V | V | S |
Query Conservation |   |
  |
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|   |   |   |   |
|
|
|
|
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
A | C | F | G | D | P | G | L | L | A | A | R | E | L | A | Q | G | P | V | I | G |
Template Known Secondary structure |   |
. | . | . | . |
| S | T | T |
| T | T |  |  |  |  |  |  |  |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |