Job Description P04994 Confidence 28.19% Date Thu Jan 5 10:58:33 GMT 2012 Rank 416 Aligned Residues 82 % Identity 9% Template c3qk7C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001 Resolution 2.70 Å

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		140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		H	C	V	G	V	I	T	S	K	.	.	.	.	.	T	G	A	A	L	H	D	I	L	H	V	L	K	R	R	D	P	S	L	P	V	I	I	Y	P	A	A	V	Q	G	D	D	A	P	G	Q	I	V	R	A	I	E	L	A	N	Q	R	N	E	C	D	V	L	I	V	G	R	G	G	G	S	L	E	D	L	W
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.																																											.	.	.	.																				.
Template Conservation																																																										.	.	.	.																				.
Template Sequence		D	A	I	A	L	A	Y	P	S	R	P	R	V	L	N	N	S	T	F	L	E	X	I	S	W	I	G	I	E	L	G	K	R	G	L	D	L	L	L	I	P	D	E	P	G	E	K	Y	Q	S	L	I	H	L	V	E	.	.	.	.	T	R	R	V	D	A	L	I	V	A	H	T	Q	P	E	D	F	R	L	.
Template Known Secondary structure										S	S	S	G	G	G																		T	T	T										T	T												.	.	.	.	T	T			S						S			S	S					.
Template Predicted Secondary structure																																																										.	.	.	.																				.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	N	D	E	R	V	A	R	A	I	F	T	S	R	I	P	V	V	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Q	Y	L	Q	K	Q	N	F	P	F	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										82	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions