Job Description P04994 Confidence 37.82% Date Thu Jan 5 10:58:33 GMT 2012 Rank 338 Aligned Residues 79 % Identity 18% Template c3pq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:poly(a) rna polymerase; PDBTitle: crystal structure of human mitochondrial poly(a) polymerase (papd1) Resolution 3.10 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																		.	210	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	L	H	D	I	L	H	V	L	K	R	R	D	P	S	L	P	V	I	I	Y	P	A	A	V	Q	G	D	D	A	P	G	Q	I	V	R	A	I	E	L	A	N	Q	R	N	E	C	D	V	L	I	V	G	R	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	D	L
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	C	S	L	I	E	D	X	A	A	A	Y	F	P	D	C	I	V	R	P	F	G	S	S	V	N	T	F	G	K	L	G	C	.	.	.	.	.	.	.	.	.	.	.	.	D	L	D	X	F	L	D	L	D	S	A	H	K	I	S	G	X	E	F	Q	V	K	N	V	P	S	E	R	I	A	T	Q	K	I
Template Known Secondary structure												T	T	T	S	T	T							G	G	G	T	S	S			B	T	T		.	.	.	.	.	.	.	.	.	.	.	.												S													S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.													.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		214	.	.	.	.	.	220	.										.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.
Query Sequence		W	S	F	N	D	E	R	V	.	.	.	.	.	.	.	.	.	A	R	A	I	F	T	S	R	I	P	V	V	S	A	V	G	H	E	T	D
Query Conservation										.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	V	L	G	E	C	L	D	H	F	G	P	G	C	V	G	V	Q	K	I	L	N	A	R	C	P	L	V	R	F	S	H	Q	A	S	G
Template Known Secondary structure												S	S	T	T									S	S	S	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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