Job Description P04994 Confidence 28.38% Date Thu Jan 5 10:58:33 GMT 2012 Rank 414 Aligned Residues 142 % Identity 24% Template c3pdiG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.										.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																									.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																									.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	C	V	G	V	I	T	S	K	T	G	A	A	L	H	.	D	I	L	H	V	L	K	R	R	D	P	S	L	P	V	I	I	Y	P	A	A	V	Q	G	.	.	.	.	.	.	.	.	.	D	D	A	P	G	Q	I	V	R	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.																									.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																									.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	A	V	F	V	Y	N	T	C	V	P	A	L	I	G	D	D	V	D	A	V	C	K	A	A	A	E	R	F	G	T	P	V	I	P	V	D	S	A	G	F	Y	G	T	K	N	L	G	N	R	I	A	G	E	A	M	L	K	Y	V	I	G	T	R	E	P	D	P	L	P	V	G	S	E	R	P	G	I	R
Template Known Secondary structure			S													T	T															T	S									G	G	G														T					T	T	S	S							T	T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
																						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.													.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.											.								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.											.								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	A	N	Q	R	N	E	C	D	V	L	I	V	G	R	G	G	G	S	L	E	D	L	W	S	F	N	D	.	.	.	.	.	.	.	.	.	.	.	.	E	R	V	A	R	A	I	F	T	S	.	R	I	P	V	V	S	A	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.											.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																						.	.	.	.	.	.	.	.	.	.	.	.											.								.
Template Conservation																													.
Template Sequence		V	H	D	V	N	L	I	G	E	Y	N	I	A	G	E	F	W	H	V	L	P	L	L	D	E	L	G	.	L	R	V	L	C	T	L	A	G	D	A	R	Y	R	E	V	Q	T	M	H	R	A	E	V	N	M	M	V	C	S	K	A	M	L	N	V	A	R	K	L	Q	E	T	Y	G	T	P	W	F	E	G	S
Template Known Secondary structure									S				B	T	T	G	G	G	G	T								T	.								T	S	S	B						T	T	G	G	G		S						S			T	T
Template Predicted Secondary structure																													.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
			236	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure		.					.																												.
Query SS confidence		.					.																												.
Query Sequence		.	V	G	H	E	.	T	D	V	T	I	A	D	F	V	A	D	L	R	A	P	T	P	S	A	A	A	E	V	V	S	R	N	.	Q	Q	E	L	L	R	Q	V	Q	S	T	R	Q	R	L
Query Conservation		.					.																												.
Alig confidence		.					.																												.
Template Conservation
Template Sequence		F	Y	G	I	T	D	T	S	Q	A	L	R	D	F	A	R	L	L	D	D	P	D	L	T	A	R	T	E	A	L	I	A	R	E	E	A	K	V	R	A	A	L	E	P	W	R	A	R	L
Template Known Secondary structure		S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions