 |
Job Description | P04994 | Confidence | 30.82% | Date | Thu Jan 5 10:58:33 GMT 2012 |
Rank | 386 | Aligned Residues | 56 |
% Identity | 20% | Template | c3nziA_ |
PDB info |
PDB header:hydrolase/hydrolase substrate | Chain: A: PDB Molecule:serine protease htra1; |
PDBTitle: substrate induced remodeling of the active site regulates htra12 activity
|
Resolution | 2.75 Å |
|
 |
  |   |
382 | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | E | R | F | G | N | A | V | T | H | L | E | A | V | S | P | L | S | T | L | A | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | Y | S | V | T | T | A | T | D | G | N | V | L | K | K | V | K | Q | V | K | A | G | E | M | L | T | T | R | L | E | D | G | W |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |
|   |
|
|
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
L | R | H | K | Y | N | F | I | A | D | V | V | E | K | I | A | P | A | V | V | H | I | E | L | F | R | K | L | P | F | S | K | R | E | V | P | V | A | S | G | S | G | F | I | V | S | E | D | G | L | I | V | T | N | A | H | V | V | T | N | K | H | R | V | K | V | E | L | K | N | G | A |
Template Known Secondary structure |   |
 |  |  |  |  |
|  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |
| S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  | S | S |
| S |  |  |  |  |  |
| S | S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|