Return to main results Retrieve Phyre Job Id

Job DescriptionP04994
Confidence22.65%DateThu Jan 5 10:58:33 GMT 2012
Rank479Aligned Residues64
% Identity16%Templatec3na8A_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........220... ......230.........240.........250
Predicted Secondary structure 













......









Query SS confidence 








































. . . . . .


























Query Sequence  GQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVAR. . . . . . AIFTSRIPVVSAVGHETDVTIADFVAD
Query Conservation    
  

         
 


 




 


  

   


......

    









 
 

 
 


Alig confidence 













.





...
















......


























Template Conservation        
  
   
.
 

  ... 




   

 


  
             

 

   
    
  
  
Template Sequence  PALGRSIERLIDGG. VHAIAP. . . LGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQF
Template Known Secondary structure  TT.
S
...SSGGGTGGGS
TTSS
B


SS
Template Predicted Secondary structure 

.

...
















Template SS confidence 









































































   45....50........ .60.... .....70.........80.........90.........100.........110....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions