Job Description P04994 Confidence 22.48% Date Thu Jan 5 10:58:33 GMT 2012 Rank 485 Aligned Residues 83 % Identity 16% Template c3l49D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:abc sugar (ribose) transporter, periplasmic PDBTitle: crystal structure of abc sugar transporter subunit from2 rhodobacter sphaeroides 2.4.1 Resolution 2.30 Å

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		140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure											.																.	.
Query SS confidence											.																.	.
Query Sequence		H	C	V	G	V	I	T	S	K	.	T	G	A	A	L	H	D	I	L	H	V	L	K	R	R	.	.	D	P	S	L	P	V	I	I	Y	P	A	A	V	Q	G	D	D	A	P	G	Q	I	V	R	A	I	E	L	A	N	Q	R	N	E	C	D	V	L	I	V	G	R	G	G	G	S	L	E	D	L	W	S	F
Query Conservation											.																.	.
Alig confidence											.																.	.												.	.	.	.																			.																.	.	.	.
Template Conservation																																								.	.	.	.																			.																.	.	.	.
Template Sequence		K	T	I	G	I	T	A	I	G	T	D	H	D	W	D	L	K	A	Y	Q	A	Q	I	A	E	I	E	R	L	G	G	T	A	I	A	L	D	A	.	.	.	.	G	R	N	D	Q	T	Q	V	S	Q	I	Q	T	L	I	A	Q	K	.	P	D	A	I	I	E	Q	L	G	N	L	D	V	L	N	.	.	.	.
Template Known Secondary structure									S				S																	T	T									.	.	.	.	T	T																	.		S						S								.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																			.																.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	E	R	V	A	R	A	I	F	T	S	R	I	P	V	V	S
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	W	L	Q	K	I	N	D	A	G	I	P	L	F	T
Template Known Secondary structure		.	.	.									T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					103	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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