Job Description P04994 Confidence 30.33% Date Thu Jan 5 10:58:33 GMT 2012 Rank 389 Aligned Residues 117 % Identity 11% Template c3ghgK_ PDB info PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen Resolution 2.90 Å

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		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	T	P	S	A	A	A	E	V	V	S	R	N	Q	Q	E	L	L	R	Q	V	Q	S	T	R	Q	R	L	E	M	A	M	D	Y	Y	L	A	N	R	T	R	R	F	T	Q	I	H	H	R	L	Q	Q	Q	H	P	Q	L	R	L	A	R	Q	Q	T	M	L	E	R	L	Q	K	R	M	S	F	A	L	E	N
Query Conservation
Alig confidence																																	.																							.	.
Template Conservation																																	.																							.	.
Template Sequence		C	P	T	G	C	Q	L	Q	E	A	L	L	Q	Q	E	R	P	I	R	N	S	V	D	E	L	N	N	N	V	E	A	.	V	S	Q	T	S	S	S	S	F	Q	Y	M	Y	L	L	K	D	L	W	Q	K	R	.	.	Q	K	Q	V	K	D	N	E	N	V	V	N	E	Y	S	S	E	L	E	K	H	Q	L	Y
Template Known Secondary structure															T	T	G	G	G	T											T	T	.	S	S							T	T													.	.
Template Predicted Secondary structure																																	.																							.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	K	R	T	G	Q	Q	Q	Q	R	L	T	Q	R	L	N	Q	Q	N	P	Q	P	K	I	H	R	A	Q	T	R	I	Q	Q	L	E	Y	R	L	A	E	T	L	R	A
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		I	D	E	T	V	N	S	N	I	P	T	N	L	R	V	L	.	.	.	.	.	R	S	I	L	E	N	L	R	S	K	I	Q	K	L	E	S	D	V	S	A	Q	M	E	Y
Template Known Secondary structure									T									.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions