Return to main results Retrieve Phyre Job Id

Job DescriptionP04994
Confidence23.28%DateThu Jan 5 10:58:33 GMT 2012
Rank472Aligned Residues77
% Identity21%Templatec3eb2A_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171..... ...180.........190.........200.........210.........220. ........230.........
Predicted Secondary structure  .....


















......







Query SS confidence 





. . . . .












































. . . . . .

















Query Sequence  IYPAAV. . . . . QGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERV. . . . . . ARAIFTSRIPVVSAVGHE
Query Conservation 
    
.....

  
   
  

         
 


 




 


  

   
......



    









Alig confidence 





.....



















.





...














......

















Template Conservation 
  
  


  

 

       
  
   
.
 

 
... 
 


   

 


  
             

 

   
Template Sequence  VFPYLVSPVDAEGRVRADVMGRLCDDLIQAG. VHGLTP. . . LGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAST
Template Known Secondary structure  B



B
TTS
B
TT.
S
BBT...TSGGGTGGG

TTSS
BS
Template Predicted Secondary structure 












.

...
















Template SS confidence 















































































   8.10.........20.........30........ .40.... .....50.........60.........70.........80...
 
   240.........250.
Predicted Secondary structure 


Query SS confidence 











Query Sequence  TDVTIADFVADL
Query Conservation   
 

 
 


 
Alig confidence 











Template Conservation 

   
  
  
Template Sequence  SVADAVAQAKLY
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 











   84.....90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions