Return to main results Retrieve Phyre Job Id

Job DescriptionP04994
Confidence23.44%DateThu Jan 5 10:58:33 GMT 2012
Rank469Aligned Residues64
% Identity23%Templatec3e96B_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 bacillus clausii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210......... 220.........230.........240....
Predicted Secondary structure 


















......









Query SS confidence 










































. . . . . .
























Query Sequence  QGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDE. . . . . . RVARAIFTSRIPVVSAVGHETDVTI
Query Conservation 

  
   
  

         
 


 




 


  

  ...... 




    









 
 

Alig confidence 



















.





...












......
























Template Conservation 

 

       
  
   
.
 

 
... 




   

  

  
             
       
   
Template Sequence  DGSIDWHHYKETVDRIVDNG. IDVIVP. . . CGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAI
Template Known Secondary structure  T

B
TTT.


T...TSTTTTGGGS
TTSS
SS
Template Predicted Secondary structure 






.

...















Template SS confidence 









































































   27..30.........40...... ...50.. .......60.........70.........80.........90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions