Job Description P04994 Confidence 21.59% Date Thu Jan 5 10:58:33 GMT 2012 Rank 495 Aligned Residues 42 % Identity 12% Template c2zkqb_ PDB info PDB header:ribosomal protein/rna Chain: B: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	V	L	I	V	G	R	G	G	G	S	L	E	D	L	W	S	F	N	D	E	R	V	A	R	A	I	F	T	S	R	I	P	V	V	S	A	V	G	H	E	T	D	V	T	I	A	D	F	V
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.
Template Sequence		P	R	L	L	V	V	T	.	.	.	.	.	.	.	.	.	D	P	R	A	D	H	Q	P	L	T	E	A	S	Y	V	N	L	P	T	I	A	L	C	N	T	D	S	P	L	R	Y	V	D	I	A
Template Known Secondary structure			S					S	.	.	.	.	.	.	.	.	.		T	T	T	T											T									T	T				T	T		S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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