Job Description P04994 Confidence 92.65% Date Thu Jan 5 10:58:33 GMT 2012 Rank 43 Aligned Residues 77 % Identity 21% Template c2vw9B_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:single-stranded dna binding protein; PDBTitle: single stranded dna binding protein complex from2 helicobacter pylori Resolution 2.30 Å

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		27	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.			.	50	.														.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.											.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.											.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	Q	V	W	I	S	G	E	I	S	N	.	.	.	F	T	Q	P	A	S	G	H	W	Y	.	.	F	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	D	T	A	Q	V	R	C	A	M	F	R	N	S	N	R	R	V	T	F	R	P	Q	H	G	Q	Q	V	L	V	R	A	N	I	T	L
Query Conservation														.	.	.											.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.											.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	K	V	I	M	V	G	R	L	T	R	N	V	E	L	K	Y	L	P	S	G	S	A	A	A	T	I	G	L	A	T	S	R	R	F	K	K	Q	D	G	T	L	G	E	E	V	C	F	I	D	A	R	L	F	G	R	T	A	E	I	A	N	Q	Y	L	S	K	G	S	S	V	L	I	E	G	R	L	T	Y
Template Known Secondary structure												S	S								T	T	S																	S	S	S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		2002	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.
		89	90				.	.	.					.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure				.	.	.				.	.	.	.
Query SS confidence				.	.	.				.	.	.	.
Query Sequence		Y	E	.	.	.	P	R	G	.	.	.	.	D	Y	Q	I	I	V	E	S	M	Q
Query Conservation				.	.	.				.	.	.	.
Alig confidence				.	.	.				.	.	.	.
Template Conservation
Template Sequence		E	S	W	M	D	Q	T	G	K	K	N	S	R	H	T	I	T	A	D	S	L	Q
Template Known Secondary structure							T	T	S
Template Predicted Secondary structure
Template SS confidence
		2082	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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