Job Description P04994 Confidence 41.36% Date Thu Jan 5 10:58:33 GMT 2012 Rank 317 Aligned Residues 83 % Identity 11% Template c2qvcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:sugar abc transporter, periplasmic sugar-binding PDBTitle: crystal structure of a periplasmic sugar abc transporter2 from thermotoga maritima Resolution 2.40 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		C	V	G	V	I	T	S	K	T	G	A	A	L	H	D	I	L	H	V	L	K	R	R	.	.	D	P	S	L	P	V	I	I	Y	P	A	A	V	Q	G	D	D	A	P	G	Q	I	V	R	A	I	E	L	A	N	Q	R	N	E	C	D	V	L	I	V	G	R	G	G	G	S	L	E	D	L	W	S	F	N	D
Query Conservation																									.	.
Alig confidence																									.	.												.	.	.																				.													.	.	.	.	.	.	.
Template Conservation																																						.	.	.																				.													.	.	.	.	.	.	.
Template Sequence		T	I	G	V	I	G	K	S	V	H	P	Y	W	S	Q	V	E	Q	G	V	K	A	A	G	K	A	L	G	V	D	T	K	F	F	V	P	.	.	.	Q	K	E	D	I	N	A	Q	L	Q	X	L	E	S	F	I	A	E	G	.	V	N	G	I	A	I	A	P	S	D	P	T	.	.	.	.	.	.	.	A	V
Template Known Secondary structure								S		S	S																		T									.	.	.	S	S																T	T	.		S							S	S	T	T	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																						.	.	.																				.													.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.								100	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	V	A	R	A	I	F	T	S	R	I	P	V	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	T	I	K	K	A	L	E	X	G	I	P	V	V	T
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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