Job Description P04994 Confidence 26.32% Date Thu Jan 5 10:58:33 GMT 2012 Rank 431 Aligned Residues 62 % Identity 16% Template c2f78A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: benm effector binding domain with its effector benzoate Resolution 2.05 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	G	V	I	T	S	K	T	G	A	A	L	H	D	I	L	H	V	L	K	R	R	D	P	S	L	P	V	I	I	Y	P	A	A	V	Q	G	D	D	A	P	G	Q	I	V	R	A	I	E	L	A	N	Q	R	N	E	C	D	V	L	I	V	G	R	G	G	G	S	L	E	D
Query Conservation
Alig confidence																																		.	.	.	.	.	.													.	.	.	.
Template Conservation																																		.	.	.	.	.	.													.	.	.	.
Template Sequence		R	I	G	F	V	G	S	L	L	F	G	L	L	P	R	I	I	H	L	Y	R	Q	A	H	P	N	L	R	I	E	L	Y	.	.	.	.	.	.	E	M	G	T	K	A	Q	T	E	A	L	K	.	.	.	.	E	G	R	I	D	A	G	F	G	R	L	K	I	S	D	P	A	I
Template Known Secondary structure							G	G	G	G	G	T	T													T	T							.	.	.	.	.	.													.	.	.	.		T	S		S					S						T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.													.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions