Job Description P04994 Confidence 22.55% Date Thu Jan 5 10:58:33 GMT 2012 Rank 484 Aligned Residues 71 % Identity 20% Template c1xjvA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:protection of telomeres 1; PDBTitle: crystal structure of human pot1 bound to telomeric single-2 stranded dna (ttagggttag) Resolution 1.73 Å

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		30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.				.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure													.	.						.	.	.											.
Query SS confidence													.	.						.	.	.											.
Query Sequence		V	W	I	S	G	E	I	S	N	F	T	.	.	Q	P	A	S	G	.	.	.	H	W	Y	F	T	L	K	D	D	T	.	A	Q	V	R	C	A	M	F	R	N	S	N	R	R	V	T	F	R	P	Q	H	G	Q	Q	V	L	V	R	A	N	I	T	L	Y	E	P	R	G	D	Y	Q	I	I	V	E	S
Query Conservation													.	.						.	.	.											.
Alig confidence													.	.						.	.	.											.																														.
Template Conservation																																																															.
Template Sequence		V	N	V	Y	G	V	V	K	F	F	K	P	P	Y	L	S	K	G	T	D	Y	C	S	V	V	T	I	V	D	Q	T	N	V	K	L	T	C	L	L	F	S	G	N	Y	E	A	L	P	I	I	Y	K	N	G	D	I	V	R	F	H	R	.	L	K	I	Q	V	Y	K	K	E	T	Q	G	I	T	S	S
Template Known Secondary structure																		S	S	S	S										T	T											S	S	G	G	G	S					S	T	T								.							T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions