 |
Job Description | P04994 | Confidence | 90.56% | Date | Thu Jan 5 10:58:33 GMT 2012 |
Rank | 60 | Aligned Residues | 53 |
% Identity | 21% | Template | c1rjnC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:menb; |
PDBTitle: the crystal structure of menb (rv0548c) from mycobacterium2 tuberculosis in complex with the coa portion of naphthoyl coa
|
Resolution | 2.30 Å |
|
 |
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | I | V | R | A | I | E | L | A | N | Q | R | N | E | C | D | V | L | I | V | G | R | G | G | G | S | . |
. |
. |
. |
. |
. |
. |
. |
L | E | D | L | W | S | F | N | D | E | R | V | A | R | A | I | F | T | S | R | I | P | V | V | S | A | V |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|
| . | . | . | . | . | . | . | . |   |
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |
|
|
| . |
|
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|
Template Sequence |   |
D | E | L | Y | R | V | L | D | H | A | R | M | S | P | D | V | G | V | V | L | L | . |
T | G | N | G | P | S | P | K | D | G | G | W | A | F | C | S | G | G | D | L | H | I | L | E | V | Q | R | L | I | R | F | M | P | K | V | V | I | C | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|
|  |  |  |  | . |  |  |
|
|
|
| T | T | T |
|
|
|  |  |  |
|
| B |
|
|
|  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|