Job Description P04994 Confidence 27.82% Date Thu Jan 5 10:58:33 GMT 2012 Rank 418 Aligned Residues 81 % Identity 20% Template c1jyeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:lactose operon repressor; PDBTitle: structure of a dimeric lac repressor with c-terminal deletion and k84l2 substitution Resolution 1.70 Å

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		142	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																	.	.
Query SS confidence								.																	.	.
Query Sequence		V	G	V	I	T	S	.	K	T	G	A	A	L	H	D	I	L	H	V	L	K	R	R	.	.	D	P	S	L	P	V	I	I	Y	P	A	A	V	Q	G	D	D	A	P	G	Q	I	V	R	A	I	E	L	A	N	Q	R	N	E	C	D	V	L	I	V	G	R	G	G	G	S	L	E	D	L	W	S	F	N	D
Query Conservation								.																	.	.
Alig confidence								.																	.	.												.	.	.																				.												.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.																				.												.	.	.	.	.	.	.	.
Template Sequence		I	G	V	A	T	S	S	L	A	L	H	A	P	S	Q	I	V	A	A	I	L	S	R	A	D	Q	L	G	A	S	V	V	V	S	M	V	.	.	.	E	R	S	G	V	E	A	C	K	T	A	V	H	N	L	L	A	Q	R	.	V	S	G	L	I	I	N	Y	P	L	D	.	.	.	.	.	.	.	.	D	Q
Template Known Secondary structure							S		T	T	S																	T	T									.	.	.		S	S	S													T	T	T	.		S						S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.																				.												.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.									130	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	V	A	R	A	I	F	T	S	R	I	P	V	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	I	A	V	E	A	A	C	T	N	V	P	A	L	F
Template Known Secondary structure										T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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