Job Description P04994 Confidence 79.89% Date Thu Jan 5 10:58:33 GMT 2012 Rank 160 Aligned Residues 76 % Identity 14% Template c1asyA_ PDB info PDB header:complex (aminoacyl-trna synthase/trna) Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: class ii aminoacyl transfer rna synthetases: crystal2 structure of yeast aspartyl-trna synthetase complexed with3 trna asp Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		G	Q	V	W	I	S	G	E	I	S	N	F	T	Q	P	A	S	G	H	W	Y	F	T	L	K	D	D	T	A	Q	V	R	C	A	M	F	R	N	S	N	R	R	V	T	F	.	.	.	.	.	.	.	R	P	Q	H	G	Q	Q	V	L	V	R	A	N	I	T	L	.	.	.	.	.	.	Y	E	P	R	G	D
Query Conservation																																															.	.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	V	L	F	R	A	R	V	H	N	T	R	Q	Q	G	A	T	L	A	F	L	T	L	R	Q	Q	A	S	L	I	Q	G	L	V	K	A	N	K	E	G	T	I	S	K	N	M	V	K	W	A	G	S	L	N	L	E	S	I	V	L	V	R	G	I	V	K	K	V	D	E	P	I	K	S	A	T	V	Q	N
Template Known Secondary structure																		T	T								S	S	S											T	T	S	S	S										T			T	T													S	S			S	S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	I	I	V	E	S	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	I	H	I	T	K	I	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions