Return to main results Retrieve Phyre Job Id

Job DescriptionP75978
Confidence9.17%DateThu Jan 5 12:16:50 GMT 2012
Rank60Aligned Residues27
% Identity7%Templated2htja1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain FaeA-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   341........350.... .....360.......
Predicted Secondary structure 



.





Query SS confidence 













.












Query Sequence  FGATGLSHDLADED. LNPVTIIQNYTNM
Query Conservation    
  
   
   
.   
 
 

   
Alig confidence 













.












Template Conservation 






  






 







 

Template Sequence  YQARYYLLLLEKAGMVQRSPLRRGMATY
Template Known Secondary structure  TS

SSSSS
Template Predicted Secondary structure 
Template SS confidence 



























   2930.........40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions