Job Description P75978 Confidence 5.66% Date Thu Jan 5 12:16:50 GMT 2012 Rank 89 Aligned Residues 93 % Identity 14% Template c3iuyB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx53; PDBTitle: crystal structure of ddx53 dead-box domain Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		S	G	M	K	L	S	S	V	A	I	M	A	R	L	A	D	F	S	N	D	E	G	V	C	W	P	S	I	E	T	I	A	R	Q	I	G	A	G	M	S	T	V	R	T	A	I	A	R	L	E	A	E	G	W	L	T	R	.	.	.	.	.	.	.	K	A	R	R	Q	G	D	G	S	S	P	H	C	A	V	V
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	P	G	M	L	V	L	T	P	T	R	E	L	A	L	H	V	E	A	E	C	S	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	K	G	L	K	S	I	C	I	Y	G	V	D	I	I	I	A	T	P	G	R	L	N	D	L	Q	M	N	N	S	V	N	L	R	S	I	T	Y	L	V	I
Template Known Secondary structure					S						S	S															.	.	.	.	.	.	.	.	.	.	.	.	.			T	T										S															T	T		S			T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.														.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Y	H	E	H	A	T	D	A	L	Y	T	T	M	L	T	G	M	G	A	R	R	Q	P	L	M	W	A	I	T	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	A	D	K	M	L	D	M	E	F	E	P	Q	I	R	K	I	L	L	D	V	R	P	D	R	Q	T	V	M	T	S	A
Template Known Secondary structure										T	T												S		S	S								S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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