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Job DescriptionP75978
Confidence53.05%DateThu Jan 5 12:16:50 GMT 2012
Rank11Aligned Residues117
% Identity8%Templatec2xgjA_
PDB info PDB header:hydrolase/rnaChain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  TKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQGDGSS
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Template Sequence  TVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMR. . E
Template Known Secondary structure  TT
SSS

SS

TT
ST
TTGG..G
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   178.180.........190.........200.........210.........220.........230.........240.........250.... .
 
   83......90.........100.........110.........120.
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Query Sequence  PHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAITTA
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Template Sequence  VAWVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSA
Template Known Secondary structure  TGGGGG
TTTS
TT

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   256...260.........270.........280.........290....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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