Return to main results Retrieve Phyre Job Id

Job DescriptionP75978
Confidence44.89%DateThu Jan 5 12:16:50 GMT 2012
Rank17Aligned Residues40
% Identity15%Templatec2jlrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:serine protease subunit ns3; PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90.........100.........110.........120.
Predicted Secondary structure 















Query SS confidence 







































Query Sequence  SPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAITTA
Query Conservation 

   
 

 
      
  

 

   
  

   



Alig confidence 







































Template Conservation      




 
                        
  

Template Sequence  NYNLIVMDEAHFTDPCSVAARGYISTRVEMGEAAAIFMTA
Template Known Secondary structure 

SSTT

STTS

S
Template Predicted Secondary structure 















Template SS confidence 







































   277..280.........290.........300.........310......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions