Job Description P75978 Confidence 6.31% Date Thu Jan 5 12:16:50 GMT 2012 Rank 86 Aligned Residues 89 % Identity 16% Template c2fsgA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: complex seca:atp from escherichia coli Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		M	S	T	K	L	T	G	Y	V	W	D	G	C	A	A	S	G	M	K	L	S	S	V	A	I	M	A	R	L	A	D	F	S	N	D	E	G	V	C	W	P	S	I	E	T	I	A	R	Q	I	G	A	G	M	S	T	V	R	T	A	I	A	R	L	E	A	E	G	W	L	T	R	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence														.	.	.																																																										.	.	.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		L	T	A	T	L	P	A	Y	L	N	A	L	.	.	.	T	G	K	G	V	H	V	V	T	V	N	D	Y	L	A	Q	R	D	A	E	N	N	R	P	L	F	E	F	L	G	L	T	V	G	I	N	L	P	G	X	P	A	P	A	K	R	E	A	Y	A	A	D	I	T	Y	G	T	N	N	E	Y	G	F	D	Y
Template Known Secondary structure				T									T	.	.	.	T	S	S							S	S																		T	T								T	T												S	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
								73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	K	A	R	R	Q	G	D	G	S	S	P	H	C	A	V	V	D	E	Y	H
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	D	N	X	A	F	S	P	E	E	R	V	Q	R	K	L	H	Y	A	L	V	D	E	V	D
Template Known Secondary structure					T	T		S	S	G	G	G												S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions