Job Description P77736 Confidence 99.90% Date Thu Jan 5 12:32:20 GMT 2012 Rank 23 Aligned Residues 190 % Identity 13% Template c3keaB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:k1l; PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	L	P	A	D	Y	L	L	A	A	Q	Q	G	D	I	D	K	V	K	T	C	L	A	L	G	V	D	I	N	T	C	D	R	Q	G	K	T	A	I	T	L	A	S	L	Y	Q	Q	Y	A	C	V	Q	A	L	I	D	A	G	A	D	I	N	K	Q	D	H	T	C	L	N	P	F	L	I	S	C	L	N	D
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		V	H	G	H	S	A	S	Y	Y	A	I	A	D	N	N	V	R	L	V	C	T	L	L	N	A	G	A	L	K	N	L	L	E	.	.	N	E	F	P	L	H	Q	A	A	T	L	E	D	T	K	I	V	K	I	L	L	F	S	G	L	D	D	S	Q	F	D	D	K	G	N	T	A	L	Y	Y	A	V	D	S	G
Template Known Secondary structure		T	T	S										T	T											T	T	G	G	G	S			T	.	.	T								T	T	S	S	S										T	T			T	T				T	T	S											T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	L	L	R	I	I	L	P	A	K	P	D	L	N	C	V	T	R	F	G	G	V	G	L	T	P	A	C	E	K	G	H	L	S	I	V	K	E	L	L	A	H	T	E	I	N	V	N	Q	T	N	H	V	G	W	T	P	L	L	E	A	I	V	L	N	D	G	G	I	K	Q	Q	A	I	V	Q	L	L
Query Conservation
Alig confidence																																													.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		N	X	Q	T	V	K	L	F	V	K	K	N	W	R	L	X	F	Y	G	K	T	G	W	K	T	S	F	Y	H	A	V	X	L	N	D	V	S	I	V	S	Y	F	L	.	.	.	.	.	.	S	E	I	P	S	T	F	D	L	A	I	L	L	S	C	I	H	I	T	I	K	N	G	H	V	D	X	X	I	L	L
Template Known Secondary structure														G	G	G	G	G		S	S	S	G	G	G	S								T	T										.	.	.	.	.	.	T	T	S		T	T				S	T											T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	E	H	G	A	S	P	H	L	T	D	K	Y	G	K	T	P	.	L	E	L	A	R	E	R	G	F	E	E	I	A	Q	L	L	I	A	A	G	A
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		L	D	Y	X	T	S	T	N	T	N	N	S	L	L	F	I	P	D	I	K	L	A	I	D	N	K	D	I	E	X	L	Q	A	L	F	K	Y	D	I
Template Known Secondary structure								T		T	T				B			T	T								T									T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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