Job Description P77736 Confidence 99.96% Date Thu Jan 5 12:32:20 GMT 2012 Rank 2 Aligned Residues 195 % Identity 15% Template c3eu9B_ PDB info PDB header:protein binding, methyl-lysine-binding p Chain: B: PDB Molecule:huntingtin-interacting protein 14; PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14 Resolution 1.99 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	L	P	A	D	Y	L	L	A	A	Q	Q	G	D	I	D	K	V	K	T	C	L	A	L	G	V	D	I	N	T	C	D	R	Q	G	K	T	A	I	T	L	A	S	L	Y	Q	Q	Y	A	C	V	Q	A	L	I	D	A	G	A	D	I	N	K	Q	D	H	T	C	L	N	P	F	L	I	S	C	L	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	S	T	W	D	I	V	K	A	T	Q	Y	G	I	Y	E	R	C	R	E	L	V	E	A	G	Y	D	V	R	Q	P	D	K	E	N	V	T	L	L	H	W	A	A	I	N	N	R	I	D	L	V	K	Y	Y	I	S	K	G	A	I	V	D	Q	L	G	G	D	L	N	S	T	P	L	H	W	A	T	R	Q
Template Known Secondary structure			G	G	G									T	T											T	T			T	T				T	T	S										T	T											T	T			T	T			B	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																															.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	T	L	L	R	I	I	L	P	A	K	P	D	L	N	C	V	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	G	V	G	L	T	P	A	C	E	K	G	H	L	S	I	V	K	E	L	L	A	H	T	E	I	N	V	N
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	L	S	M	V	V	Q	L	M	K	Y	G	A	D	P	S	L	I	D	G	E	G	C	S	C	I	H	L	A	A	Q	F	G	H	T	S	I	V	A	Y	L	I	A	K	G	Q	D	V	D	M	M	D	Q	N	G	M	T	P	L	M	W	A	A	Y	R	T	H	S	V	D	P	T	R	L	L	L	T	F	N
Template Known Secondary structure		T										T	T	T			T	T				T	T	S										T	T												T			T	T				T	T	S													S	S	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	N	H	V	G	W	T	P	L	L	E	A	I	V	L	N	D	G	G	I	K	Q	Q	A	I	V	Q	L	L	L	E	H	G	A	S	P	H	L	T	D	K	Y	G	K	T	P	L	E	L	A	R	E	R	G	F	E	E	I	A	Q	L	L	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	V	N	L	G	D	K	Y	H	K	N	T	A	L	H	W	A	V	L	A	G	N	T	T	V	I	S	L	L	L	E	A	G	A	N	V	D	A	Q	N	I	K	G	E	S	A	L	D	L	A	K	Q	R	K	N	V	W	M	I	N	H	L	Q	E
Template Known Secondary structure				T	T		B		S	S	S			B								T	T											T	T			S	S				T	T	S			S								T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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