Job Description P77736 Confidence 99.78% Date Thu Jan 5 12:32:20 GMT 2012 Rank 50 Aligned Residues 120 % Identity 27% Template c3ehrB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:osteoclast-stimulating factor 1; PDBTitle: crystal structure of human osteoclast stimulating factor Resolution 1.95 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	L	P	A	D	Y	L	L	A	A	Q	Q	G	D	I	D	K	V	K	T	C	L	A	L	G	V	D	I	N	T	C	D	R	Q	G	K	T	A	I	T	L	A	S	L	Y	Q	Q	Y	A	C	V	Q	A	L	I	D	A	G	A	D	I	N	K	Q	D	H	T	C	L	N	P	F	L	I	S	C	L	N	D
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	I	D	N	P	L	H	E	A	A	K	R	G	N	L	S	W	L	R	E	C	L	D	N	R	V	G	V	N	G	L	D	K	A	G	S	T	A	L	Y	W	A	C	H	G	G	H	K	D	I	V	E	X	L	F	T	Q	P	N	I	E	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S										T											T	T			T	T				T	T	S										T	T									T	T	S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	L	L	R	I	I	L	P	A	K	P	D	L	N	C	V	T	R	F	G	G	V	G	L	T	P	A	C	E	K	G	H	L	S	I	V	K	E	L	L	A	H	T	E	I	N	V	N	Q	T	N	H	V	G	W	T	P	L	L	E	A	I	V	L	N	D	G	G	I	K	Q	Q	A	I	V	Q	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	N	K	L	G	D	T	A	L	H	A	A	A	W	K	G	Y	A	D	I	V	Q	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S											T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																									135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	H	G	A	S	P	H	L	T	D	K	Y	G	K	T	P	L	E	L	A	R	E	R	G	F	E	E	I	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	K	G	A	R	T	D	L	R	N	I	E	K	K	L	A	F	D	X	A	T	N	A	A	C	A	S	L	L	K
Template Known Secondary structure					T			S					T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions