Job Description P77736 Confidence 99.93% Date Thu Jan 5 12:32:20 GMT 2012 Rank 18 Aligned Residues 196 % Identity 15% Template c2rfaA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain Resolution 1.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	P	A	D	Y	L	L	A	A	Q	Q	G	D	I	D	K	V	K	T	C	L	A	.	L	G	V	D	I	N	T	C	D	R	Q	G	K	T	A	I	T	L	A	S	L	Y	Q	Q	Y	A	C	V	Q	A	L	I	D	A	G	A	D	I	N	K	Q	D	H	T	C	L	N	P	F	L	I	S	C	L	N	D	D
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		W	E	S	P	L	L	L	A	A	K	E	N	D	V	Q	A	L	S	K	L	L	K	F	E	G	C	E	V	H	Q	R	G	A	M	G	E	T	A	L	H	I	A	A	L	Y	D	N	L	E	A	A	M	V	L	M	E	A	A	P	E	L	V	F	E	P	M	T	S	E	L	Y	E	G	Q	T	A	L	H	I	A
Template Known Secondary structure		T	T									T	T										T	T	T		S		T	T				T	T	S										T	T													G	G	G	G	G					S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	L	R	I	I	L	P	A	K	P	D	L	N	C	V	T	R	F	G	G	V	G	L	T	P	A	C	E	K	G	H	L	S	I	V	K	E	L	L	A	H	T	E	I	N	V	N	Q	T	N	H	V	G	W	T	P	L	L	E	A	I	V	L	N	D	G	G	I	K	Q	Q	A	I	V	Q	L	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	N	Q	N	V	N	L	V	R	A	L	L	A	R	G	A	S	V	S	A	R	A	T	G	S	V	F	H	Y	R	P	H	N	L	I	Y	Y	G	E	H	P	L	S	F	A	A	C	V	G	S	E	E	I	V	R	L	L	I	E	H	G	A	D	I	R	A	Q	D	S	L	G	N	T	V	L	H	I	L	I
Template Known Secondary structure				T	T											T	T			T	T					S	G	G	G	S			T	T		S					S	S									T											T	T			T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		165	.	.	.																							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	H	L	T	D	K	Y	G	K	T	P	L	E	L	A	R	E	R	G	F	E	E	I	A	Q	L	L	I	A	A	G	A
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	P	N	K	T	F	A	C	Q	M	Y	N	L	L	L	S	Y	D	G	G	D	H	L	K	S	L	E	L	V	P	N	N	Q	G	L	T	P	F	K	L	A	G	V	E	G	N	I	V	M	F	Q	H	L	M	Q	K	R	K
Template Known Secondary structure		T		S															T	T		S		S	S			G	G	G				T	T	S											T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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