Job Description P0ACU2 Confidence 56.29% Date Thu Jan 5 11:19:03 GMT 2012 Rank 444 Aligned Residues 60 % Identity 23% Template d2lfba_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain Resolution UNK

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																						.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	Q	G	A	V	K	T	T	G	K	R	S	R	.	A	V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	S	K	T	N	L	L	Y	Y
Query Conservation																.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		M	A	R	I	D	P	T	K	K	G	R	R	N	R	F	K	W	G	P	A	S	Q	Q	I	L	F	Q	A	Y	E	R	.	.	Q	K	N	P	S	K	E	E	R	E	T	L	V	E	E	C	N	R	A	E	C	I	Q	R	G	V	S	P	S	Q	A	Q	G	L	G	S	N	L	V	T	E	V	R	V	Y	N	W
Template Known Secondary structure									S		S	S		S	S																T	T	.	.		S	S			S																			T			G	G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure																																	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		59	60	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	N	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions